Sub-visible particle classification and label consistency analysis for flow-imaging microscopy via machine learning methods
Angela Lopez del Rio
Former PhD researcher at B2SLab, UPC (2017–2021), focused on quality and reliability of deep learning models for drug discovery. Now Data Scientist at Boehringer Ingelheim.
Keywords
deep learning, drug discovery, biomedical engineering, bioinformatics, UPC, protein-compound interaction
Bio
Hi! I am a biomedical engineer (BSc from the Technical University of Madrid and MSc from the University of Barcelona/Polytechnic University of Catalonia). I did my PhD, advised by Dr. Alexandre Perera Lluna, at the B2SLab between 2017-2021.
It focused on ways to ensure the quality and reliability of deep learning models used to predict how proteins and compounds interact in the early stages of drug discovery.
During my PhD, I collaborated with the start-up Mind the Byte and did a research stay at Uniprot, in the European Bioinformatics Institute (EMBL) in Cambridge, UK. Since 2020, I have been working as a Data Scientist at the pharma company Boehringer Ingelheim, first in R&D in Biberach (Germany) and now back in Barcelona, in the Business Operations department.
PhD Thesis
You can access my PhD thesis Data preprocessing and quality diagnosis in deep learning-based in silico bioactivity prediction here.
Publications
You can also check my journal papers, also available through Google Scholar
20241 publications
20213 publications
Balancing data on deep learning-based proteochemometric activity classification
Balancing data on proteochemometrics activity classification
Data preprocessing and quality diagnosis in deep learning-based in silico bioactivity prediction
20201 publications
Effect of sequence padding on the performance of deep learning models in archaeal protein functional prediction
20191 publications
Evaluation of cross-validation strategies in sequence-based binding prediction using deep learning
20171 publications
Machine-Learning QSAR Model for Predicting Activity against Malaria Parasite's Ion Pump PfATP4 and In Silico Binding Assay Validation
20161 publications
Desarrollo de una plataforma web para el acceso interactivo a una base de datos SQL con información biológica de competiciones deportivas
Unknown Year1 publications
Effect of Sequence Padding on the Performance of Protein-Based Deep Learning Models
Social Networks
You can contact me on LinkedIn